Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vamp8O70404 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vamp8O70404 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Vamp8O70404 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Vamp8O70404 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Gm42642-201ENSMUST00000200683 355 ntBASIC10.07□□□□□ -0.8
Vamp8O70404 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Vamp8O70404 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.07□□□□□ -0.8
Vamp8O70404 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Vamp8O70404 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.07□□□□□ -0.8
Vamp8O70404 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Vamp8O70404 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vamp8O70404 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.06□□□□□ -0.8
Vamp8O70404 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.06□□□□□ -0.8
Vamp8O70404 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
Vamp8O70404 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.06□□□□□ -0.8
Vamp8O70404 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.06□□□□□ -0.8
Vamp8O70404 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Vamp8O70404 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vamp8O70404 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.06□□□□□ -0.8
Vamp8O70404 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Vamp8O70404 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Vamp8O70404 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.05□□□□□ -0.8
Vamp8O70404 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vamp8O70404 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms