Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.79□□□□□ -0.52
Trav18A0A075B656 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Thap2-203ENSMUST00000218989 527 ntBASIC11.79□□□□□ -0.52
Trav18A0A075B656 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.79□□□□□ -0.52
Trav18A0A075B656 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm5177-201ENSMUST00000183092 997 ntBASIC11.78□□□□□ -0.52
Trav18A0A075B656 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm2651-201ENSMUST00000203560 838 ntBASIC11.78□□□□□ -0.52
Trav18A0A075B656 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav18A0A075B656 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.77□□□□□ -0.52
Trav18A0A075B656 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav18A0A075B656 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.77□□□□□ -0.53
Trav18A0A075B656 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.77□□□□□ -0.53
Trav18A0A075B656 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.77□□□□□ -0.53
Trav18A0A075B656 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav18A0A075B656 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms