Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gm23984-201ENSMUST00000157139 203 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gm28760-201ENSMUST00000185995 736 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gm6745-201ENSMUST00000199216 526 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.11■□□□□ 0.33
Stag1Q9D3E6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Gm15393-201ENSMUST00000120499 219 ntBASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Gm8515-201ENSMUST00000194852 576 ntBASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag1Q9D3E6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm12882-201ENSMUST00000121696 517 ntBASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm18018-201ENSMUST00000198273 408 ntBASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm45668-201ENSMUST00000211271 493 ntBASIC17.09■□□□□ 0.33
Stag1Q9D3E6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag1Q9D3E6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms