Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga4Q91XY4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gm43125-201ENSMUST00000201724 730 ntBASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga4Q91XY4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Gm2810-201ENSMUST00000118681 990 ntBASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga4Q91XY4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga4Q91XY4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms