Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx41Q91VN6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm38294-201ENSMUST00000192831 381 ntBASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm18049-201ENSMUST00000208909 581 ntBASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx41Q91VN6 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx41Q91VN6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx41Q91VN6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Gm27306-201ENSMUST00000183970 107 ntBASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.51■□□□□ 0.23
Ddx41Q91VN6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms