Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp25Q8VIK1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.08■□□□□ 0.01
Snrnp25Q8VIK1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Mir6956-201ENSMUST00000183598 62 ntBASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Gm38294-201ENSMUST00000192831 381 ntBASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Gm45453-201ENSMUST00000211758 853 ntBASIC15.08■□□□□ 0
Snrnp25Q8VIK1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snrnp25Q8VIK1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Gm27622-201ENSMUST00000183779 60 ntBASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Snrnp25Q8VIK1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp25Q8VIK1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms