Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm12895-201ENSMUST00000122214 226 ntBASIC12.28□□□□□ -0.44
Sox19Q62249 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm6659-201ENSMUST00000174752 547 ntBASIC12.28□□□□□ -0.44
Sox19Q62249 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm4535-201ENSMUST00000182274 558 ntBASIC12.28□□□□□ -0.44
Sox19Q62249 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox19Q62249 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.28□□□□□ -0.44
Sox19Q62249 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox19Q62249 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm10355-201ENSMUST00000097146 517 ntBASIC12.28□□□□□ -0.44
Sox19Q62249 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sox19Q62249 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox19Q62249 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sox19Q62249 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sox19Q62249 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox19Q62249 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox19Q62249 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox19Q62249 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox19Q62249 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Gm27704-201ENSMUST00000185094 107 ntBASIC12.27□□□□□ -0.45
Sox19Q62249 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox19Q62249 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox19Q62249 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox19Q62249 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox19Q62249 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox19Q62249 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox19Q62249 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox19Q62249 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox19Q62249 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox19Q62249 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Sox19Q62249 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.26□□□□□ -0.45
Sox19Q62249 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox19Q62249 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox19Q62249 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox19Q62249 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms