Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm42550-201ENSMUST00000201553 960 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Mir483-201ENSMUST00000093631 73 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 AC166992.1-201ENSMUST00000216356 565 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm10076-201ENSMUST00000073238 384 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm7848-201ENSMUST00000210739 718 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm29608-201ENSMUST00000190444 463 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm45224-201ENSMUST00000208203 414 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 CT025694.1-201ENSMUST00000226188 934 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm8793-201ENSMUST00000183069 1303 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 AC153526.5-201ENSMUST00000218661 2147 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm8492-201ENSMUST00000182375 987 ntBASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ush2AQ2QI47 Gm43195-201ENSMUST00000200614 2332 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm8856-201ENSMUST00000185254 1144 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm45856-201ENSMUST00000212752 416 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm7551-201ENSMUST00000089593 1074 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm9062-201ENSMUST00000117712 727 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm11930-201ENSMUST00000117788 190 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms