Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Gm6013-201ENSMUST00000212264 699 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lrch1P62046 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
Lrch1P62046 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Lrch1P62046 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lrch1P62046 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lrch1P62046 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.86■□□□□ 0.29
Lrch1P62046 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.86■□□□□ 0.29
Lrch1P62046 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Lrch1P62046 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.86■□□□□ 0.29
Lrch1P62046 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.86■□□□□ 0.29
Lrch1P62046 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Lrch1P62046 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lrch1P62046 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lrch1P62046 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.85■□□□□ 0.29
Lrch1P62046 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lrch1P62046 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lrch1P62046 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.85■□□□□ 0.29
Lrch1P62046 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.85■□□□□ 0.29
Lrch1P62046 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lrch1P62046 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.85■□□□□ 0.29
Lrch1P62046 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.85■□□□□ 0.29
Lrch1P62046 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.85■□□□□ 0.29
Lrch1P62046 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.85■□□□□ 0.29
Lrch1P62046 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lrch1P62046 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lrch1P62046 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lrch1P62046 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrch1P62046 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrch1P62046 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lrch1P62046 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lrch1P62046 Gm40466-201ENSMUST00000212174 422 ntBASIC16.84■□□□□ 0.29
Lrch1P62046 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrch1P62046 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrch1P62046 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms