Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rom1P32958 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rom1P32958 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Rom1P32958 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Rom1P32958 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rom1P32958 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Rom1P32958 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.37□□□□□ -0.59
Rom1P32958 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Gm29257-201ENSMUST00000186115 639 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Gm9182-201ENSMUST00000217829 639 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Rom1P32958 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rom1P32958 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rom1P32958 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.37□□□□□ -0.59
Rom1P32958 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rom1P32958 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Rom1P32958 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.36□□□□□ -0.59
Rom1P32958 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.36□□□□□ -0.59
Rom1P32958 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.36□□□□□ -0.59
Rom1P32958 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Gm37153-201ENSMUST00000193637 231 ntBASIC11.36□□□□□ -0.59
Rom1P32958 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Gm9682-201ENSMUST00000197505 556 ntBASIC11.36□□□□□ -0.59
Rom1P32958 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.36□□□□□ -0.59
Rom1P32958 Olfr286-202ENSMUST00000205305 969 ntBASIC11.36□□□□□ -0.59
Rom1P32958 Gm7787-201ENSMUST00000216858 688 ntBASIC11.36□□□□□ -0.59
Rom1P32958 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.36□□□□□ -0.59
Rom1P32958 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rom1P32958 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rom1P32958 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rom1P32958 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rom1P32958 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms