Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06344 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
P06344 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
P06344 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
P06344 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P06344 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
P06344 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.83□□□□□ -0.35
P06344 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
P06344 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.83□□□□□ -0.36
P06344 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.83□□□□□ -0.36
P06344 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.83□□□□□ -0.36
P06344 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.83□□□□□ -0.36
P06344 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.83□□□□□ -0.36
P06344 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
P06344 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.83□□□□□ -0.36
P06344 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06344 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.83□□□□□ -0.36
P06344 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
P06344 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.83□□□□□ -0.36
P06344 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.82□□□□□ -0.36
P06344 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
P06344 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
P06344 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.82□□□□□ -0.36
P06344 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.82□□□□□ -0.36
P06344 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.82□□□□□ -0.36
P06344 Gm13223-201ENSMUST00000118609 747 ntBASIC12.82□□□□□ -0.36
P06344 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.82□□□□□ -0.36
P06344 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
P06344 Gm25144-201ENSMUST00000179561 110 ntBASIC12.82□□□□□ -0.36
P06344 Gm25352-201ENSMUST00000179815 110 ntBASIC12.82□□□□□ -0.36
P06344 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Mir7023-201ENSMUST00000185093 64 ntBASIC12.82□□□□□ -0.36
P06344 Gm38294-201ENSMUST00000192831 381 ntBASIC12.82□□□□□ -0.36
P06344 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.82□□□□□ -0.36
P06344 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Carlr-201ENSMUST00000181515 2574 ntBASIC12.82□□□□□ -0.36
P06344 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P06344 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
P06344 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
P06344 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P06344 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms