Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Gm15358-201ENSMUST00000119249 520 ntBASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Gm43799-201ENSMUST00000201845 579 ntBASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Upk3bl1Q9D701 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gm44454-201ENSMUST00000198541 138 ntBASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk3bl1Q9D701 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms