Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm24694-201ENSMUST00000180054 110 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm27663-201ENSMUST00000184839 110 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm9229-201ENSMUST00000222777 126 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 AC140375.2-201ENSMUST00000225283 584 ntBASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16■□□□□ 0.15
Ddx39aQ8VDW0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 AA619741-201ENSMUST00000195095 646 ntBASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Gm20445-201ENSMUST00000061905 565 ntBASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx39aQ8VDW0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Gm6916-202ENSMUST00000205523 195 ntBASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Carlr-201ENSMUST00000181515 2574 ntBASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms