Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.08□□□□□ -0.96
Cystm1Q8K353 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.08□□□□□ -0.96
Cystm1Q8K353 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.08□□□□□ -0.96
Cystm1Q8K353 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Gm15442-201ENSMUST00000117905 1527 ntBASIC9.08□□□□□ -0.96
Cystm1Q8K353 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm32996-201ENSMUST00000199828 1447 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cystm1Q8K353 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.07□□□□□ -0.96
Cystm1Q8K353 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cystm1Q8K353 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cystm1Q8K353 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms