Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hist3h2bbQ8CGP0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Hist3h2bbQ8CGP0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist3h2bbQ8CGP0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Gm26524-201ENSMUST00000192339 390 ntBASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist3h2bbQ8CGP0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Hist3h2bbQ8CGP0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms