Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Gm27501-201ENSMUST00000183599 107 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap54Q8C6S9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Gm6013-201ENSMUST00000212264 699 ntBASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cfap54Q8C6S9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cfap54Q8C6S9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cfap54Q8C6S9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cfap54Q8C6S9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cfap54Q8C6S9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Gm4857-201ENSMUST00000192718 785 ntBASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap54Q8C6S9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms