Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.82□□□□□ -0.2
SynbQ8BI41 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.82□□□□□ -0.2
SynbQ8BI41 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Gm17837-201ENSMUST00000186435 985 ntBASIC13.82□□□□□ -0.2
SynbQ8BI41 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.82□□□□□ -0.2
SynbQ8BI41 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SynbQ8BI41 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SynbQ8BI41 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SynbQ8BI41 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.81□□□□□ -0.2
SynbQ8BI41 Gm25144-201ENSMUST00000179561 110 ntBASIC13.81□□□□□ -0.2
SynbQ8BI41 Gm25352-201ENSMUST00000179815 110 ntBASIC13.81□□□□□ -0.2
SynbQ8BI41 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.81□□□□□ -0.2
SynbQ8BI41 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.81□□□□□ -0.2
SynbQ8BI41 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SynbQ8BI41 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SynbQ8BI41 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.8□□□□□ -0.2
SynbQ8BI41 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.8□□□□□ -0.2
SynbQ8BI41 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SynbQ8BI41 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.8□□□□□ -0.2
SynbQ8BI41 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SynbQ8BI41 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.79□□□□□ -0.2
SynbQ8BI41 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SynbQ8BI41 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SynbQ8BI41 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.79□□□□□ -0.2
SynbQ8BI41 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SynbQ8BI41 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SynbQ8BI41 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SynbQ8BI41 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms