Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav5d-4Q5R1F6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gm11779-201ENSMUST00000118541 368 ntBASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gm17271-201ENSMUST00000165535 355 ntBASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5d-4Q5R1F6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Gm15427-201ENSMUST00000117288 531 ntBASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Rpph1-201ENSMUST00000175096 319 ntBASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 AW822252-206ENSMUST00000208904 237 ntBASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms