Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.4□□□□□ -0.1
Col6a2Q02788 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.4□□□□□ -0.1
Col6a2Q02788 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a2Q02788 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a2Q02788 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.39□□□□□ -0.11
Col6a2Q02788 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Dupd1-202ENSMUST00000224735 548 ntBASIC14.39□□□□□ -0.11
Col6a2Q02788 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Col6a2Q02788 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a2Q02788 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.38□□□□□ -0.11
Col6a2Q02788 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Mir8102-201ENSMUST00000184148 139 ntBASIC14.38□□□□□ -0.11
Col6a2Q02788 Gm7063-201ENSMUST00000186840 981 ntBASIC14.38□□□□□ -0.11
Col6a2Q02788 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Gm9063-201ENSMUST00000223299 582 ntBASIC14.38□□□□□ -0.11
Col6a2Q02788 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.38□□□□□ -0.11
Col6a2Q02788 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms