Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga2P52927 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.27□□□□□ -0.44
Hmga2P52927 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Hmga2P52927 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga2P52927 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.27□□□□□ -0.44
Hmga2P52927 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga2P52927 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm14859-201ENSMUST00000117752 357 ntBASIC12.27□□□□□ -0.45
Hmga2P52927 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm8584-201ENSMUST00000171982 758 ntBASIC12.27□□□□□ -0.45
Hmga2P52927 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.27□□□□□ -0.45
Hmga2P52927 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.27□□□□□ -0.45
Hmga2P52927 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmga2P52927 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmga2P52927 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmga2P52927 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hmga2P52927 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Gm25990-201ENSMUST00000102440 86 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 Gm7222-201ENSMUST00000117512 906 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Gm33142-201ENSMUST00000193913 867 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.26□□□□□ -0.45
Hmga2P52927 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.26□□□□□ -0.45
Hmga2P52927 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Hmga2P52927 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmga2P52927 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmga2P52927 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms