Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.41□□□□□ -0.58
P01788 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01788 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.41□□□□□ -0.58
P01788 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P01788 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Gm11764-201ENSMUST00000120221 623 ntBASIC11.41□□□□□ -0.58
P01788 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.41□□□□□ -0.58
P01788 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
P01788 Gm7230-201ENSMUST00000173026 815 ntBASIC11.41□□□□□ -0.58
P01788 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P01788 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.41□□□□□ -0.58
P01788 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.41□□□□□ -0.58
P01788 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.41□□□□□ -0.58
P01788 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P01788 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01788 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.41□□□□□ -0.58
P01788 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
P01788 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.4□□□□□ -0.58
P01788 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.4□□□□□ -0.58
P01788 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01788 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.4□□□□□ -0.58
P01788 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P01788 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01788 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.4□□□□□ -0.58
P01788 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01788 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.4□□□□□ -0.58
P01788 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P01788 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01788 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P01788 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.39□□□□□ -0.59
P01788 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.39□□□□□ -0.59
P01788 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.39□□□□□ -0.59
P01788 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.39□□□□□ -0.59
P01788 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.39□□□□□ -0.59
P01788 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
P01788 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.39□□□□□ -0.59
P01788 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.39□□□□□ -0.59
P01788 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.39□□□□□ -0.59
P01788 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.39□□□□□ -0.59
P01788 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.39□□□□□ -0.59
P01788 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P01788 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
P01788 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01788 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms