Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Stx1aO35526 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.23■□□□□ 0.19
Stx1aO35526 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.23■□□□□ 0.19
Stx1aO35526 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.23■□□□□ 0.19
Stx1aO35526 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.23■□□□□ 0.19
Stx1aO35526 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.23■□□□□ 0.19
Stx1aO35526 Gm6376-201ENSMUST00000209407 580 ntBASIC16.23■□□□□ 0.19
Stx1aO35526 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.23■□□□□ 0.19
Stx1aO35526 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Stx1aO35526 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Stx1aO35526 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stx1aO35526 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Stx1aO35526 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Stx1aO35526 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.22■□□□□ 0.19
Stx1aO35526 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.22■□□□□ 0.19
Stx1aO35526 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.22■□□□□ 0.19
Stx1aO35526 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.22■□□□□ 0.19
Stx1aO35526 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stx1aO35526 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.22■□□□□ 0.19
Stx1aO35526 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Stx1aO35526 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.21■□□□□ 0.19
Stx1aO35526 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Stx1aO35526 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Stx1aO35526 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.21■□□□□ 0.19
Stx1aO35526 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Stx1aO35526 Gm28033-201ENSMUST00000184224 96 ntBASIC16.21■□□□□ 0.19
Stx1aO35526 Gm27459-201ENSMUST00000184860 107 ntBASIC16.21■□□□□ 0.19
Stx1aO35526 Gm34391-201ENSMUST00000203706 907 ntBASIC16.21■□□□□ 0.19
Stx1aO35526 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.21■□□□□ 0.19
Stx1aO35526 Birc2-201ENSMUST00000054878 378 ntBASIC16.21■□□□□ 0.19
Stx1aO35526 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Stx1aO35526 Rps4l-201ENSMUST00000071745 943 ntBASIC16.21■□□□□ 0.19
Stx1aO35526 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Stx1aO35526 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stx1aO35526 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Stx1aO35526 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Stx1aO35526 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Stx1aO35526 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Stx1aO35526 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Stx1aO35526 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.2■□□□□ 0.18
Stx1aO35526 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.2■□□□□ 0.18
Stx1aO35526 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Stx1aO35526 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms