Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm45747-201ENSMUST00000212203 999 ntBASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh9F8VPK8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gm5479-201ENSMUST00000160578 435 ntBASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gm9727-201ENSMUST00000161387 555 ntBASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh9F8VPK8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh9F8VPK8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms