Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AA414768-201ENSMUST00000121924 1257 ntBASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms