Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm14722-201ENSMUST00000118943 689 ntBASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm13559-201ENSMUST00000120476 863 ntBASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Paupar-201ENSMUST00000194826 3482 ntBASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Gm11355-201ENSMUST00000121120 306 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
Trav8-1A0A075B641 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav8-1A0A075B641 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav8-1A0A075B641 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Celf4-206ENSMUST00000224553 1729 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm27011-201ENSMUST00000182352 972 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm7889-201ENSMUST00000185591 958 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms