Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm6222-201ENSMUST00000120787 396 ntBASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lysmd3Q99LE3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gm13453-201ENSMUST00000118708 357 ntBASIC15□□□□□ -0.01
Lysmd3Q99LE3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Gm27533-201ENSMUST00000183800 152 ntBASIC15□□□□□ -0.01
Lysmd3Q99LE3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15□□□□□ -0.01
Lysmd3Q99LE3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Carlr-201ENSMUST00000181515 2574 ntBASIC15□□□□□ -0.01
Lysmd3Q99LE3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lysmd3Q99LE3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lysmd3Q99LE3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Gm12151-201ENSMUST00000121374 290 ntBASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms