Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Psmb5-202ENSMUST00000227257 622 ntBASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps39Q8R5L3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps39Q8R5L3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms