Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.29■□□□□ 0.84
Cd109Q8R422 Gm13385-201ENSMUST00000121089 220 ntBASIC20.29■□□□□ 0.84
Cd109Q8R422 Gm15376-201ENSMUST00000122258 783 ntBASIC20.29■□□□□ 0.84
Cd109Q8R422 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Gm19078-201ENSMUST00000206311 727 ntBASIC20.29■□□□□ 0.84
Cd109Q8R422 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd109Q8R422 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd109Q8R422 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.28■□□□□ 0.84
Cd109Q8R422 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Gm8463-201ENSMUST00000208573 613 ntBASIC20.28■□□□□ 0.84
Cd109Q8R422 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Gm45630-201ENSMUST00000210243 1911 ntBASIC20.28■□□□□ 0.84
Cd109Q8R422 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Cd109Q8R422 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd109Q8R422 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Gm5356-201ENSMUST00000093326 615 ntBASIC20.27■□□□□ 0.84
Cd109Q8R422 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cd109Q8R422 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Cd109Q8R422 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Cd109Q8R422 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd109Q8R422 AC159196.2-201ENSMUST00000224082 1622 ntBASIC20.27■□□□□ 0.84
Cd109Q8R422 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd109Q8R422 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC20.27■□□□□ 0.83
Cd109Q8R422 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC20.27■□□□□ 0.83
Cd109Q8R422 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.83
Cd109Q8R422 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd109Q8R422 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd109Q8R422 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd109Q8R422 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cd109Q8R422 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.26■□□□□ 0.83
Cd109Q8R422 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cd109Q8R422 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms