Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Gm17968-201ENSMUST00000194902 784 ntBASIC17.86■□□□□ 0.45
Smc5Q8CG46 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smc5Q8CG46 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.85■□□□□ 0.45
Smc5Q8CG46 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.85■□□□□ 0.45
Smc5Q8CG46 Gm15483-201ENSMUST00000120338 456 ntBASIC17.85■□□□□ 0.45
Smc5Q8CG46 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.85■□□□□ 0.45
Smc5Q8CG46 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Gm7461-201ENSMUST00000058918 827 ntBASIC17.85■□□□□ 0.45
Smc5Q8CG46 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc5Q8CG46 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.84■□□□□ 0.45
Smc5Q8CG46 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.84■□□□□ 0.45
Smc5Q8CG46 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc5Q8CG46 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Smc5Q8CG46 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms