Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Gm24420-201ENSMUST00000176676 59 ntBASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Gm44855-201ENSMUST00000205725 362 ntBASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Znf541Q0GGX2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm18905-201ENSMUST00000205454 928 ntBASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm42612-201ENSMUST00000197986 623 ntBASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm43170-201ENSMUST00000199827 612 ntBASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.17■□□□□ 0.5
Znf541Q0GGX2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.16■□□□□ 0.5
Znf541Q0GGX2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm5866-201ENSMUST00000177881 973 ntBASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Znf541Q0GGX2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Gm8927-201ENSMUST00000181978 981 ntBASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Gm5279-201ENSMUST00000199575 745 ntBASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Gm3222-201ENSMUST00000071282 990 ntBASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Znf541Q0GGX2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Znf541Q0GGX2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms