Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox3P53784 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.87□□□□□ -0.19
Sox3P53784 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.87□□□□□ -0.19
Sox3P53784 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox3P53784 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox3P53784 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox3P53784 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Sox3P53784 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox3P53784 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Sox3P53784 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
Sox3P53784 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.86□□□□□ -0.19
Sox3P53784 Gm14928-201ENSMUST00000120198 477 ntBASIC13.86□□□□□ -0.19
Sox3P53784 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox3P53784 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox3P53784 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox3P53784 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.86□□□□□ -0.19
Sox3P53784 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.86□□□□□ -0.19
Sox3P53784 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox3P53784 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Sox3P53784 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox3P53784 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Gm15487-201ENSMUST00000122373 465 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Mir7085-201ENSMUST00000184353 66 ntBASIC13.85□□□□□ -0.19
Sox3P53784 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.85□□□□□ -0.19
Sox3P53784 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox3P53784 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.85□□□□□ -0.19
Sox3P53784 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.85□□□□□ -0.19
Sox3P53784 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sox3P53784 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Gm9899-201ENSMUST00000065519 555 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox3P53784 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Sox3P53784 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Syt7-204ENSMUST00000223586 1344 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox3P53784 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sox3P53784 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.85□□□□□ -0.19
Sox3P53784 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox3P53784 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sox3P53784 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox3P53784 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms