Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Mir8102-201ENSMUST00000184148 139 ntBASIC11.93□□□□□ -0.5
Cdkn1aP39689 Gm27631-201ENSMUST00000184163 466 ntBASIC11.93□□□□□ -0.5
Cdkn1aP39689 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.93□□□□□ -0.5
Cdkn1aP39689 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.92□□□□□ -0.5
Cdkn1aP39689 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Gm12428-201ENSMUST00000119844 727 ntBASIC11.92□□□□□ -0.5
Cdkn1aP39689 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Mir6977-201ENSMUST00000184960 64 ntBASIC11.92□□□□□ -0.5
Cdkn1aP39689 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdkn1aP39689 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Gm9063-201ENSMUST00000223299 582 ntBASIC11.92□□□□□ -0.5
Cdkn1aP39689 Dupd1-202ENSMUST00000224735 548 ntBASIC11.92□□□□□ -0.5
Cdkn1aP39689 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn1aP39689 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.91□□□□□ -0.5
Cdkn1aP39689 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Mir7684-201ENSMUST00000183858 60 ntBASIC11.91□□□□□ -0.5
Cdkn1aP39689 Gm45453-201ENSMUST00000211758 853 ntBASIC11.91□□□□□ -0.5
Cdkn1aP39689 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms