Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm27359-201ENSMUST00000184153 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm27785-201ENSMUST00000184268 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm27466-201ENSMUST00000184396 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm27703-201ENSMUST00000184836 110 ntBASIC13.24□□□□□ -0.29
P01852 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Gm2451-201ENSMUST00000199447 999 ntBASIC13.24□□□□□ -0.29
P01852 Gm10290-201ENSMUST00000200451 999 ntBASIC13.24□□□□□ -0.29
P01852 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
P01852 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P01852 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P01852 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P01852 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.24□□□□□ -0.29
P01852 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.23□□□□□ -0.29
P01852 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
P01852 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.23□□□□□ -0.29
P01852 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
P01852 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.23□□□□□ -0.29
P01852 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.23□□□□□ -0.29
P01852 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Gm5479-201ENSMUST00000160578 435 ntBASIC13.23□□□□□ -0.29
P01852 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.23□□□□□ -0.29
P01852 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.23□□□□□ -0.29
P01852 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.23□□□□□ -0.29
P01852 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
P01852 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
P01852 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P01852 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01852 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P01852 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P01852 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01852 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P01852 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.22□□□□□ -0.29
P01852 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.22□□□□□ -0.29
P01852 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.22□□□□□ -0.29
P01852 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.22□□□□□ -0.29
P01852 Gm9726-201ENSMUST00000180321 678 ntBASIC13.22□□□□□ -0.29
P01852 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.22□□□□□ -0.29
P01852 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Gm45098-201ENSMUST00000207179 657 ntBASIC13.22□□□□□ -0.29
P01852 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.22□□□□□ -0.29
P01852 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01852 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01852 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P01852 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms