Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm10275-201ENSMUST00000092620 635 ntBASIC17.2■□□□□ 0.34
Hdac1O09106 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac1O09106 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hdac1O09106 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hdac1O09106 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Hdac1O09106 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hdac1O09106 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hdac1O09106 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hdac1O09106 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.19■□□□□ 0.34
Hdac1O09106 Gm11452-201ENSMUST00000122376 690 ntBASIC17.19■□□□□ 0.34
Hdac1O09106 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.19■□□□□ 0.34
Hdac1O09106 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.19■□□□□ 0.34
Hdac1O09106 Gm15590-201ENSMUST00000078419 552 ntBASIC17.19■□□□□ 0.34
Hdac1O09106 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.19■□□□□ 0.34
Hdac1O09106 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.19■□□□□ 0.34
Hdac1O09106 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac1O09106 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hdac1O09106 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.18■□□□□ 0.34
Hdac1O09106 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hdac1O09106 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Gm7977-201ENSMUST00000193787 748 ntBASIC17.18■□□□□ 0.34
Hdac1O09106 Gm21362-201ENSMUST00000194272 928 ntBASIC17.18■□□□□ 0.34
Hdac1O09106 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.18■□□□□ 0.34
Hdac1O09106 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac1O09106 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac1O09106 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac1O09106 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.17■□□□□ 0.34
Hdac1O09106 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hdac1O09106 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.17■□□□□ 0.34
Hdac1O09106 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hdac1O09106 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.17■□□□□ 0.34
Hdac1O09106 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.17■□□□□ 0.34
Hdac1O09106 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.17■□□□□ 0.34
Hdac1O09106 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac1O09106 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Hdac1O09106 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.16■□□□□ 0.34
Hdac1O09106 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Gm5177-201ENSMUST00000183092 997 ntBASIC17.16■□□□□ 0.34
Hdac1O09106 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Hdac1O09106 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hdac1O09106 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac1O09106 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms