Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx6-2D3Z4R4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gm15039-201ENSMUST00000118914 875 ntBASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gm25925-201ENSMUST00000158314 306 ntBASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Celf4-206ENSMUST00000224553 1729 ntBASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx6-2D3Z4R4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms