Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 COX11P1-201ENST00000489116 835 ntBASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC133561.5-201ENST00000635547 218 ntBASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF103-CHMP3A0A140T963 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF103-CHMP3A0A140T963 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF103-CHMP3A0A140T963 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF103-CHMP3A0A140T963 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF103-CHMP3A0A140T963 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF103-CHMP3A0A140T963 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL441883.1-201ENST00000566170 1045 ntBASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC079602.3-201ENST00000623931 403 ntBASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL031432.5-201ENST00000641059 760 ntBASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RNF103-CHMP3A0A140T963 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL391807.1-203ENST00000604392 2365 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC105020.1-201ENST00000435356 2205 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 KRT89P-201ENST00000620027 1478 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC113347.1-201ENST00000413321 391 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 SPDYE15P-201ENST00000424157 909 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC116407.2-201ENST00000613639 860 ntBASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms