Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.04□□□□□ -0.32
H2afb3S4R1G7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb3S4R1G7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb3S4R1G7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms