Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gm13464-201ENSMUST00000119418 935 ntBASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClcnkaQ9WUB7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClcnkaQ9WUB7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClcnkaQ9WUB7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClcnkaQ9WUB7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClcnkaQ9WUB7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClcnkaQ9WUB7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClcnkaQ9WUB7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms