Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Pck2-205ENSMUST00000226352 2784 ntBASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn1Q9CWM4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn1Q9CWM4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn1Q9CWM4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.71□□□□□ -0.38
Pfdn1Q9CWM4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms