Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39lQ9CQD0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 AC158538.2-201ENSMUST00000225455 906 ntBASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39lQ9CQD0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Mir5130-201ENSMUST00000175160 84 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm8318-201ENSMUST00000182954 872 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm43767-201ENSMUST00000198933 381 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm30025-201ENSMUST00000218555 728 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 AC159205.6-201ENSMUST00000224935 887 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms