Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Olfr286-202ENSMUST00000205305 969 ntBASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf3Q99LI7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.01□□□□□ -0.17
Cstf3Q99LI7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf3Q99LI7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14□□□□□ -0.17
Cstf3Q99LI7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Gm27301-201ENSMUST00000184012 127 ntBASIC14□□□□□ -0.17
Cstf3Q99LI7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14□□□□□ -0.17
Cstf3Q99LI7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cstf3Q99LI7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf3Q99LI7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms