Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.05■□□□□ 0.32
Col20a1Q923P0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col20a1Q923P0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gm15957-201ENSMUST00000118893 974 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.04■□□□□ 0.32
Col20a1Q923P0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col20a1Q923P0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.03■□□□□ 0.32
Col20a1Q923P0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col20a1Q923P0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Gm22189-201ENSMUST00000103822 86 ntBASIC17.02■□□□□ 0.32
Col20a1Q923P0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Gm12585-201ENSMUST00000117307 290 ntBASIC17.02■□□□□ 0.32
Col20a1Q923P0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Gm9522-201ENSMUST00000182394 926 ntBASIC17.02■□□□□ 0.32
Col20a1Q923P0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms