Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Rpph1-201ENSMUST00000175096 319 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm27430-201ENSMUST00000184585 107 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm44333-201ENSMUST00000197168 107 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkd2Q8VE28 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gm23547-201ENSMUST00000158210 271 ntBASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gm25948-201ENSMUST00000175334 112 ntBASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkd2Q8VE28 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Mir449b-201ENSMUST00000104833 80 ntBASIC13.21□□□□□ -0.29
Nkd2Q8VE28 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms