Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc9Q8VC31 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Gm25927-201ENSMUST00000175058 117 ntBASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc9Q8VC31 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Gm6257-201ENSMUST00000163864 910 ntBASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc9Q8VC31 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc9Q8VC31 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Gm4780-202ENSMUST00000215200 2644 ntBASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms