Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf4Q8K4J2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Ebf4Q8K4J2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gm7506-201ENSMUST00000207758 815 ntBASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gm18032-201ENSMUST00000222541 538 ntBASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf4Q8K4J2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm9013-201ENSMUST00000132939 882 ntBASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Mir3081-201ENSMUST00000175305 84 ntBASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf4Q8K4J2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms