Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox30Q8CGW4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox30Q8CGW4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox30Q8CGW4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox30Q8CGW4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sox30Q8CGW4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.8■□□□□ 0.12
Sox30Q8CGW4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox30Q8CGW4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Gm27301-201ENSMUST00000184012 127 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Gm7461-201ENSMUST00000058918 827 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Gm15590-201ENSMUST00000078419 552 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox30Q8CGW4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms