Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc2Q8CG48 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.58■□□□□ 0.25
Smc2Q8CG48 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc2Q8CG48 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc2Q8CG48 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gm12260-201ENSMUST00000122447 411 ntBASIC16.57■□□□□ 0.24
Smc2Q8CG48 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gm44492-201ENSMUST00000197012 141 ntBASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.57■□□□□ 0.24
Smc2Q8CG48 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc2Q8CG48 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Gm18206-201ENSMUST00000207027 926 ntBASIC16.56■□□□□ 0.24
Smc2Q8CG48 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.56■□□□□ 0.24
Smc2Q8CG48 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc2Q8CG48 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smc2Q8CG48 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Smc2Q8CG48 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smc2Q8CG48 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc2Q8CG48 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms