Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.97■□□□□ 0.15
Trim9Q8C7M3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.97■□□□□ 0.15
Trim9Q8C7M3 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim9Q8C7M3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim9Q8C7M3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim9Q8C7M3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trim9Q8C7M3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms