Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Gm27631-201ENSMUST00000184163 466 ntBASIC16.94■□□□□ 0.3
Usp44Q8C2S0 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 BC001981-202ENSMUST00000191393 1545 ntBASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp44Q8C2S0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp44Q8C2S0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Gm6222-201ENSMUST00000120787 396 ntBASIC16.92■□□□□ 0.3
Usp44Q8C2S0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Gm28630-201ENSMUST00000187806 498 ntBASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp44Q8C2S0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Gm14701-201ENSMUST00000117156 348 ntBASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Gm12428-201ENSMUST00000119844 727 ntBASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Gm7774-201ENSMUST00000200064 533 ntBASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms