Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Depdc1bQ8BH88 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm13464-201ENSMUST00000119418 935 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm13365-201ENSMUST00000121188 973 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm11745-201ENSMUST00000121669 448 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Rprl2-201ENSMUST00000157150 290 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm9726-201ENSMUST00000180321 678 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm5312-201ENSMUST00000203728 547 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Gm10154-201ENSMUST00000084445 354 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Depdc1bQ8BH88 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms